Research Projects
Projects I've worked on, on my own and with the lab.
Cardiac Physiology Action Potential Sandbox
An interactive cardiac electrophysiology playground to explore ion-channel effects, drug presets, pacing, and ECGs.
ECG Basics — Rate, Rhythm, Axis
An interactive walkthrough of ECG rate, rhythm, and axis interpretation.
COVID-19 Case Prediction Model Comparison
A COVID-19 case prediction model comparing LSTM/GRU, ARIMA, Random Forest, and XGBoost algorithms.
Does a Human-Adaptation Signal Learned in One Herpesvirus Subfamily Transfer to the Others?
A deep neural network trained only on Betaherpesvirus genomes correctly predicts human-host compatibility for Alpha- ...
Machine Learning Cookbook for Epidemiological Modeling and Viral Genomics
A working reference on applying machine learning to epidemiology and viral genomics, from research design through dee...
MambaVirus
MambaVirus is a 1 billion parameter foundational genomic model trained on labeled viral genomes, genes, and instructi...
Modeling Novel Proteins of Mutant Human Cytomegalovirus
Structural analysis of mutant Rab3A proteins in recombinant HCMV strains.
GI Pathology — NBME-Style Practice Exam
A self-scoring, NBME/USMLE-style practice block for GI pathology — pick your topics, answer in tutor mode with instan...
Renal Physiology & Pathology — NBME-Style Practice Exam
A self-scoring, NBME/USMLE-style practice block for renal physiology and pathology — acid-base, body fluids, potassiu...
Step 1 Microbiology — NBME-Style Practice Exam
A self-scoring, NBME/USMLE-style microbiology bank covering every high-yield bacterium, virus, fungus, and parasite —...
System for Operational Modeling of Biological Replication and Adaptation (SOMBRA)
A system to generate artificial HCMV genomes and simulate evolution to characterize geographical strain diversity.
Sequence-Based Virus Host Prediction — A Curated Dataset and Generalizable Framework
A 58,046-genome dataset and neural network framework that predicts whether a virus can infect humans directly from ra...
Want to talk about any of this?
Feel free to reach out. I'm always happy to chat about research or new ideas.
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